GST for Amazon, Flipkart, Meesho and Marketplace Sellers — Who Must Register (and the Unregistered Intra-State Route Since October 2023), 0.5% TCS by the Marketplace and How to Claim It, Section 9(5) Services Where the Platform Pays, Multi-State Registrations for FBA Warehouses, Returns, Cancellations and Commission Credit, and Support for Online Sellers in Rajasthan

₹20 lakh
Below this turnover an unregistered seller may sell goods within the home state through a marketplace (since 1 October 2023)
0.5%
TCS collected by the marketplace on net taxable supplies (0.25% CGST + 0.25% SGST, or 0.5% IGST) since 10 July 2024
Section 9(5)
Cabs, restaurants, hotels (unregistered) and housekeeping — the platform pays the GST, not the seller
Per state
A registration (or additional place of business) in every state where the marketplace stores your stock
Share:
Guide by BookMyCA's Chartered Accountants · pan-India serviceLast verified against official guidelines on 7 September 2026.

Video Explanation & Insights

Selling on Flipkart and Amazon: when GST registration is and is not required

4 videos on this topic

Registration

Who must register — 2017 versus now

When GST began in 2017, anyone selling goods through an e-commerce operator (ECO) had to register regardless of turnover under section 24(ix) — the video's 'no registration needed' relief of November 2017 applied only to service providers within the ₹20 lakh threshold (other than section 9(5) services). Since 1 October 2023, a person supplying goods can sell through a marketplace without registration if aggregate turnover is within the threshold (₹20 lakh; ₹10 lakh in the special-category states), the supply is within the home state only, the seller has a PAN and an enrolment number from the GST portal, and no inter-state supply is made — the operator collects no TCS from such sellers but reports them. Composition dealers may also sell goods through ECOs within their state since the same date. Everyone else — inter-state sellers, sellers above the threshold, and sellers who want input credit and a refund of TCS — registers as a regular taxpayer.

SellerRegistrationNotes
Goods, intra-state only, turnover ≤ ₹20 lakhOptional — enrolment number instead of GSTINNo inter-state sales (which rules out most marketplaces' national delivery); no ITC; the marketplace must support the enrolment flow
Goods, any inter-state sale or turnover > ₹20 lakhCompulsory regular registrationThreshold does not apply — section 24(ix)
Composition dealer (goods)Allowed through ECO for intra-state suppliesNo TCS refund complexity beyond the 0.5%; no inter-state
Services through a platform (not 9(5))Threshold of ₹20 lakh appliesFreelance/IT/consulting via marketplaces
Section 9(5) services — cabs, restaurants via food apps, hotels (unregistered), housekeeping via appsPlatform is liable to pay GSTRestaurant partners still register for their own dine-in supplies; the platform pays on app orders
TCS

TCS by the marketplace — and how to get it back

  • Rate: 0.5% of the net value of taxable supplies made through the operator (gross sales minus returns in the month), reduced from 1% with effect from 10 July 2024; collected by Amazon, Flipkart, Meesho, Myntra, Nykaa and the rest and deposited in GSTR-8 by the 10th of the next month.
  • Claiming it: the TCS appears in the seller's 'TCS and TDS credit received' table on the portal; accept it, and the amount is credited to the electronic cash ledger — usable to pay tax, or refundable in RFD-01 if it accumulates (common for 5%-rated goods with high returns).
  • Reconciliation: match the operator's monthly TCS statement with GSTR-8 data, your sales register and settlement reports; differences arise from returns credited in a later month, cancelled orders and the operator's invoice date vs your dispatch date.
  • GSTR-1: supplies through ECOs are reported in Table 14 (by the supplier) and Table 15 (by the operator for 9(5) supplies) since January 2024; B2C sales stay state-wise in Table 7 with the ECO detail.
  • Marketplace invoices: the commission, shipping, advertising and closing-fee invoices carry 18% GST — claim the credit in GSTR-3B after checking GSTR-2B; sellers under the unregistered route lose this credit.
Multi-state

Warehouses, additional places of business and place of supply

  1. 1Stock in a marketplace warehouse (Amazon FBA, Flipkart Smart/FAssured, Myntra) makes that warehouse your place of business: register in that state (GSTIN with the warehouse as an additional place of business, using the operator's NOC/agreement) before stock moves there.
  2. 2Stock transfer to your own GSTIN in another state is a taxable supply between distinct persons: raise a tax invoice at cost-plus (rule 28 open-market value or 90% of resale price), pay IGST, and claim it as credit in the receiving state; e-way bill for consignments above ₹50,000.
  3. 3Place of supply for goods is where delivery ends — the buyer's address; the marketplace's order data decides CGST/SGST vs IGST and the state in your Table 7/14 reporting.
  4. 4Returns and cancellations: issue credit notes (Table 9B) for returns accepted in the same financial year up to 30 November of the next year; RTO (return-to-origin) shipments that never reach the customer are cancelled invoices, not credit notes, if the invoice is cancelled in the same period.
  5. 5E-invoicing applies once aggregate turnover crosses ₹5 crore — the marketplace's invoice for B2C orders is not an e-invoice; B2B (business buyers on Amazon Business) needs IRNs.
Rajasthan

Support for online sellers in Rajasthan

Rajasthan's MSME and industrial-promotion policies subsidise digital tools for small traders and manufacturers who sell online — barcode/QR scanners, CRM and inventory-management software and marketplace onboarding — with reimbursement of a share of the cost (the channel's short cites 75% with a cap) for Udyam-registered units. The scheme, its ceiling and the application window change with each policy cycle (RIPS 2024, the MSME policy and the district industries centre's promotional schemes); we confirm the live scheme for a seller's district before advising, and file it alongside the GST set-up.

Udyam registration (free, on udyamregistration.gov.in) is the common gate for these supports and for the 45-day payment protection under section 43B(h) against business buyers.
FAQs

Marketplace GST: questions we are asked

Not compulsorily since October 2023 — take the enrolment number and sell intra-state only; the moment an order ships to another state you need a regular GSTIN.

No — it is an advance that lands in your cash ledger once you accept it in the TCS credit table; you still pay the output tax and can use the TCS against it.

Yes — a registration in Haryana with the warehouse as an additional place of business; sales from that stock are Haryana supplies.

The platform pays the GST on those orders under section 9(5); report them as 9(5) supplies in Table 14 without tax; your dine-in sales are taxed normally.

Yes if you are a regular taxpayer — the operator's invoices appear in GSTR-2B; the unregistered and composition routes cannot.

Yes — registration map by state, TCS reconciliation, GSTR-1 Tables 14/15, credit notes for returns, ITC on commission, and Rajasthan support schemes.